Please cite aroma.cn as

H. Bengtsson, P. Neuvial and T.P. SpeedTumorBoost: Normalization of allele-specific tumor copy numbers from a single pair of tumor-normal genotyping microarrays, BMC Bioinformatics, 2010

H. Bengtsson, A. Ray, P. Spellman and T.P. Speed. A single-sample method for normalizing and combining full-resolutioncopy numbers from multiple platforms, labs and analysis methods, Bioinformatics, 2009

H. Bengtsson; K. Simpson; J. Bullard; K. Hansen. aroma.affymetrix: A generic framework in R for analyzing small to very large Affymetrix data sets in bounded memory, Tech Report 745, Department of Statistics, University of California, Berkeley, February 2008

H. Bengtsson, R. Irizarry, B. Carvalho, & T.P. Speed. Estimation and assessment of raw copy numbers at the single locus level, Bioinformatics, 2008

Corresponding BibTeX entries:

  @Article{,
    author = {H. Bengtsson and Pierre Neuvial and Terence P Speed},
    title = {TumorBoost: Normalization of allele-specific tumor copy
      numbers from a single pair of tumor-normal genotyping
      microarrays},
    journal = {BMC Bioinformatics},
    year = {2010},
    month = {May},
    volume = {11},
    number = {245},
    url = {http://www.biomedcentral.com/1471-2105/11/245/},
  }

  @Article{,
    author = {Henrik Bengtsson and Amrita Ray and Paul Spellman and
      Terence P Speed},
    title = {A single-sample method for normalizing and combining
      full-resolutioncopy numbers from multiple platforms, labs and
      analysis methods},
    journal = {Bioinformatics},
    year = {2009},
    month = {February},
  }

  @TechReport{,
    author = {H. Bengtsson and K. Simpson and J. Bullard and K.
      Hansen},
    title = {{aroma.affymetrix}: A generic framework in {R} for
      analyzing small to very large {Affymetrix} data sets in bounded
      memory},
    institution = {Department of Statistics, University of California,
      Berkeley},
    year = {2008},
    month = {February},
    number = {745},
  }

  @Article{,
    author = {Henrik Bengtsson and R. Irizarry and B. Carvalho and T.P.
      Speed},
    title = {Estimation and assessment of raw copy numbers at the
      single locus level},
    journal = {Bioinformatics},
    year = {2008},
    url = {http://dx.doi.org/10.1093/bioinformatics/btn016},
  }